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Package apollo.dataadapter.organism

Interface Summary
ApolloNameAdapterI  
OrganismAdapterI These are all of the facets of editing and display that must be customized on a per organism project basis
OverlapI areOverlapping determines if two SeqFeatureIs overlap using the currently defined gene definition (from Config.getGeneDefinition().
 

Class Summary
DefaultNameAdapter  
FlyNameAdapter  
FlyOverlap A class detect overlapping transcripts for Drosophila
HumanOverlap areOverlapping determines if two SeqFeatureIs overlap using the currently defined gene definition (from Config.getGeneDefinition().
OrganismAdapter  
SimpleOverlap areOverlapping determines if two SeqFeatureIs overlap using the currently defined gene definition (from Config.getGeneDefinition().