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apollo.dataadapter.otter.parser
Class SequenceFragmentAccessionTagHandler  

java.lang.Object
  apollo.dataadapter.otter.parser.TagHandler
      apollo.dataadapter.otter.parser.SequenceFragmentAccessionTagHandler

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public class SequenceFragmentAccessionTagHandler

extends TagHandler

I add on the name of the current sequence fragment.

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Field Summary

 

Fields inherited from class apollo.dataadapter.otter.parser.TagHandler

ACCESSION, ASSEMBLY_END, ASSEMBLY_OFFSET, ASSEMBLY_ORI, ASSEMBLY_START, ASSEMBLY_TYPE, AUTHOR, AUTHOR_EMAIL, CDS_END_NOT_FOUND, CDS_START_NOT_FOUND, CHROMOSOME, END, EVIDENCE, EXON, FRAME, ID, INDENT, KEYWORD, LEFT, LOCUS, LOCUS_TYPE, MRNA_END_NOT_FOUND, MRNA_START_NOT_FOUND, NAME, OTTER, REMARK, RETURN, RIGHT, SEQUENCE_FRAGMENT, SEQUENCE_SET, SLASH, STABLE_ID, START, STRAND, SYNONYM, TRANSCRIPT, TRANSCRIPT_CLASS, TRANSLATION_END, TRANSLATION_START, TYPE, VERSION

 

Constructor Summary

SequenceFragmentAccessionTagHandler()

 

Method Summary
java.lang.String	getFullName()
java.lang.String	getLeafName()
void	handleCharacters(OtterContentHandler theContentHandler, char[] text, int start, int length)

 

Methods inherited from class apollo.dataadapter.otter.parser.TagHandler

handleEndElement, handleStartElement

 

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

 

Constructor Detail

SequenceFragmentAccessionTagHandler

public SequenceFragmentAccessionTagHandler()

Method Detail

handleCharacters

public void handleCharacters(OtterContentHandler theContentHandler,
                             char[] text,
                             int start,
                             int length)

Overrides:

handleCharacters in class TagHandler

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getFullName

public java.lang.String getFullName()

Specified by:

getFullName in class TagHandler

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getLeafName

public java.lang.String getLeafName()

Specified by:

getLeafName in class TagHandler

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Overview  Package   Class  Use  Deprecated  Index
Home >> All >> apollo >> dataadapter >> otter >> [ parser overview ]	PREV CLASS  NEXT CLASS
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