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edu.stanford.genetics.treeview.dendroview
Class ATRZoomView  

java.lang.Object
  java.awt.Component
      java.awt.Container
          javax.swing.JComponent
              javax.swing.JPanel
                  edu.stanford.genetics.treeview.ModelView
                      edu.stanford.genetics.treeview.dendroview.ATRZoomView

All Implemented Interfaces:

javax.accessibility.Accessible, java.util.EventListener, java.awt.image.ImageObserver, java.awt.event.KeyListener, java.awt.MenuContainer, java.awt.event.MouseListener, java.util.Observer, java.io.Serializable

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public class ATRZoomView

extends edu.stanford.genetics.treeview.ModelView

implements java.awt.event.MouseListener, java.awt.event.KeyListener

Draws an array tree to show the relations between arrays This object requires a MapContainer to figure out the offsets for the arrays. Furthermore, it sets up a scrollbar to scroll the tree, although there is currently no way to specify how large you would like the scrollable area to be, so the height is just set to match the available space.

Version:

$Revision: 1.7 $ $Date: 2003/10/12 01:29:15 $

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Nested Class Summary

 

Nested classes inherited from class javax.swing.JPanel

javax.swing.JPanel.AccessibleJPanel

 

Nested classes inherited from class javax.swing.JComponent

javax.swing.JComponent.AccessibleJComponent

 

Nested classes inherited from class java.awt.Container

java.awt.Container.AccessibleAWTContainer

 

Nested classes inherited from class java.awt.Component

java.awt.Component.AccessibleAWTComponent, java.awt.Component.BltBufferStrategy, java.awt.Component.FlipBufferStrategy

 

Field Summary
private  edu.stanford.genetics.treeview.CdtSelection	cdtSelection
private  java.awt.Rectangle	destRect
private  InvertedTreeDrawer	drawer
protected  edu.stanford.genetics.treeview.HeaderSummary	headerSummary
private static java.lang.String[]	hints
private  javax.swing.JScrollBar	scrollbar
private  edu.stanford.genetics.treeview.TreeDrawerNode	selectedNode
private  edu.stanford.genetics.treeview.LinearTransformation	xScaleEq
private  edu.stanford.genetics.treeview.LinearTransformation	yScaleEq
private  MapContainer	zoomMap

 

Fields inherited from class edu.stanford.genetics.treeview.ModelView

hasMouse, hint, offscreenChanged, offscreenSize, offscreenValid, panel, status, viewFrame

 

Fields inherited from class javax.swing.JComponent

accessibleContext, listenerList, TOOL_TIP_TEXT_KEY, ui, UNDEFINED_CONDITION, WHEN_ANCESTOR_OF_FOCUSED_COMPONENT, WHEN_FOCUSED, WHEN_IN_FOCUSED_WINDOW

 

Fields inherited from class java.awt.Container

 

Fields inherited from class java.awt.Component

BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT

 

Fields inherited from interface java.awt.image.ImageObserver

ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH

 

Constructor Summary

ATRZoomView()           Constructor, sets up AWT components

 

Method Summary
void	adjustmentValueChanged(java.awt.event.AdjustmentEvent evt)           Need to blit another part of the buffer to the screen when the scrollbar moves.
edu.stanford.genetics.treeview.HeaderSummary	getHeaderSummary()           Getter for headerSummary
java.lang.String[]	getHints()
java.lang.String[]	getStatus()           Gets some user-interpretatble status information for the ATRZoomView object
void	keyPressed(java.awt.event.KeyEvent e)           Use keypress to navigate nodes up selects parent of current.
void	keyReleased(java.awt.event.KeyEvent e)           Ignore key releases
void	keyTyped(java.awt.event.KeyEvent e)           Ignore key types
void	mouseClicked(java.awt.event.MouseEvent e)           On mouseclick, select a node
void	setCdtSelection(edu.stanford.genetics.treeview.CdtSelection cdtSelection)           Set CdtSelection
void	setHeaderSummary(edu.stanford.genetics.treeview.HeaderSummary headerSummary)           Setter for headerSummary
void	setInvertedTreeDrawer(InvertedTreeDrawer d)           Set the drawer
void	setSelectedNode(edu.stanford.genetics.treeview.TreeDrawerNode n)           Set the selected node, update the CdtSelection, and redraw Does nothing if the node is already selected.
void	setZoomMap(MapContainer m)           Set the zoom map Specifies where to draw leaves of tree.
private  void	synchMap()
void	update(java.util.Observable o, java.lang.Object arg)           expect updates to come from cdtSelection, zoomMap and drawer
void	updateBuffer(java.awt.Graphics g)           updates buffer to reflect current state
java.lang.String	viewName()           Implementation of abstract method

 

Methods inherited from class edu.stanford.genetics.treeview.ModelView

addNotify, getComponent, getViewFrame, mouseDragged, mouseEntered, mouseExited, mouseMoved, mousePressed, mouseReleased, paintComponent, paintComposite, setHintPanel, setStatusPanel, setViewFrame

 

Methods inherited from class javax.swing.JPanel

getAccessibleContext, getUI, getUIClassID, paramString, setUI, updateUI

 

Methods inherited from class javax.swing.JComponent

addAncestorListener, addPropertyChangeListener, addVetoableChangeListener, computeVisibleRect, contains, createToolTip, disable, enable, firePropertyChange, firePropertyChange, firePropertyChange, fireVetoableChange, getActionForKeyStroke, getActionMap, getAlignmentX, getAlignmentY, getAncestorListeners, getAutoscrolls, getBorder, getBounds, getClientProperty, getComponentGraphics, getConditionForKeyStroke, getDebugGraphicsOptions, getDefaultLocale, getGraphics, getHeight, getInputMap, getInputMap, getInputVerifier, getInsets, getInsets, getListeners, getLocation, getMaximumSize, getMinimumSize, getNextFocusableComponent, getPreferredSize, getRegisteredKeyStrokes, getRootPane, getSize, getToolTipLocation, getToolTipText, getToolTipText, getTopLevelAncestor, getTransferHandler, getVerifyInputWhenFocusTarget, getVetoableChangeListeners, getVisibleRect, getWidth, getX, getY, grabFocus, isDoubleBuffered, isLightweightComponent, isManagingFocus, isMaximumSizeSet, isMinimumSizeSet, isOpaque, isOptimizedDrawingEnabled, isPaintingTile, isPreferredSizeSet, isRequestFocusEnabled, isValidateRoot, paint, paintBorder, paintChildren, paintImmediately, paintImmediately, print, printAll, printBorder, printChildren, printComponent, processComponentKeyEvent, processKeyBinding, processKeyEvent, processMouseMotionEvent, putClientProperty, registerKeyboardAction, registerKeyboardAction, removeAncestorListener, removeNotify, removeVetoableChangeListener, repaint, repaint, requestDefaultFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, resetKeyboardActions, reshape, revalidate, scrollRectToVisible, setActionMap, setAlignmentX, setAlignmentY, setAutoscrolls, setBackground, setBorder, setDebugGraphicsOptions, setDefaultLocale, setDoubleBuffered, setEnabled, setFont, setForeground, setInputMap, setInputVerifier, setMaximumSize, setMinimumSize, setNextFocusableComponent, setOpaque, setPreferredSize, setRequestFocusEnabled, setToolTipText, setTransferHandler, setUI, setVerifyInputWhenFocusTarget, setVisible, unregisterKeyboardAction, update

 

Methods inherited from class java.awt.Container

add, add, add, add, add, addContainerListener, addImpl, addPropertyChangeListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalKeys, getFocusTraversalPolicy, getLayout, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusCycleRoot, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, printComponents, processContainerEvent, processEvent, remove, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusCycleRoot, setFocusTraversalKeys, setFocusTraversalPolicy, setLayout, transferFocusDownCycle, validate, validateTree

 

Methods inherited from class java.awt.Component

action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, createImage, createImage, createVolatileImage, createVolatileImage, disableEvents, dispatchEvent, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBackground, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusCycleRootAncestor, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphicsConfiguration, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputContext, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocale, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMouseWheelListeners, getName, getParent, getPeer, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getToolkit, getTreeLock, gotFocus, handleEvent, hasFocus, hide, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isShowing, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, postEvent, prepareImage, prepareImage, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processMouseEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, resize, resize, setBounds, setBounds, setComponentOrientation, setCursor, setDropTarget, setFocusable, setFocusTraversalKeysEnabled, setIgnoreRepaint, setLocale, setLocation, setLocation, setName, setSize, setSize, show, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle

 

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

 

Methods inherited from interface java.awt.event.MouseListener

mouseEntered, mouseExited, mousePressed, mouseReleased

 

Field Detail

headerSummary

protected edu.stanford.genetics.treeview.HeaderSummary headerSummary

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hints

private static final java.lang.String[] hints

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cdtSelection

private edu.stanford.genetics.treeview.CdtSelection cdtSelection

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xScaleEq

private edu.stanford.genetics.treeview.LinearTransformation xScaleEq

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yScaleEq

private edu.stanford.genetics.treeview.LinearTransformation yScaleEq

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zoomMap

private MapContainer zoomMap

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scrollbar

private javax.swing.JScrollBar scrollbar

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drawer

private InvertedTreeDrawer drawer

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selectedNode

private edu.stanford.genetics.treeview.TreeDrawerNode selectedNode

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destRect

private java.awt.Rectangle destRect

Constructor Detail

ATRZoomView

public ATRZoomView()

Constructor, sets up AWT components

Method Detail

setHeaderSummary

public void setHeaderSummary(edu.stanford.genetics.treeview.HeaderSummary headerSummary)

Setter for headerSummary

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getHeaderSummary

public edu.stanford.genetics.treeview.HeaderSummary getHeaderSummary()

Getter for headerSummary

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getHints

public java.lang.String[] getHints()

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setSelectedNode

public void setSelectedNode(edu.stanford.genetics.treeview.TreeDrawerNode n)

Set the selected node, update the CdtSelection, and redraw Does nothing if the node is already selected.

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synchMap

private void synchMap()

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setCdtSelection

public void setCdtSelection(edu.stanford.genetics.treeview.CdtSelection cdtSelection)

Set CdtSelection

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setInvertedTreeDrawer

public void setInvertedTreeDrawer(InvertedTreeDrawer d)

Set the drawer

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setZoomMap

public void setZoomMap(MapContainer m)

Set the zoom map Specifies where to draw leaves of tree.

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update

public void update(java.util.Observable o,
                   java.lang.Object arg)

expect updates to come from cdtSelection, zoomMap and drawer

Specified by:

update in interface java.util.Observer

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adjustmentValueChanged

public void adjustmentValueChanged(java.awt.event.AdjustmentEvent evt)

Need to blit another part of the buffer to the screen when the scrollbar moves.

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viewName

public java.lang.String viewName()

Implementation of abstract method

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getStatus

public java.lang.String[] getStatus()

Gets some user-interpretatble status information for the ATRZoomView object

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updateBuffer

public void updateBuffer(java.awt.Graphics g)

updates buffer to reflect current state

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mouseClicked

public void mouseClicked(java.awt.event.MouseEvent e)

On mouseclick, select a node

Specified by:

mouseClicked in interface java.awt.event.MouseListener

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keyPressed

public void keyPressed(java.awt.event.KeyEvent e)

Use keypress to navigate nodes up selects parent of current. left selects left child. right selects right child down selects child with most descendants.

Specified by:

keyPressed in interface java.awt.event.KeyListener

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keyReleased

public void keyReleased(java.awt.event.KeyEvent e)

Ignore key releases

Specified by:

keyReleased in interface java.awt.event.KeyListener

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keyTyped

public void keyTyped(java.awt.event.KeyEvent e)

Ignore key types

Specified by:

keyTyped in interface java.awt.event.KeyListener

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Overview  Package   Class  Use  Deprecated  Index
Home >> All >> edu >> stanford >> genetics >> treeview >> [ dendroview overview ]	PREV CLASS  NEXT CLASS
SUMMARY:  JAVADOC |  SOURCE |  DOWNLOAD | NESTED | FIELD | CONSTR | METHOD	DETAIL: FIELD | CONSTR | METHOD

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