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joelib.process.types
Class DistanceCalculation  

java.lang.Object
  joelib.process.SimpleProcess
      joelib.process.types.DistanceCalculation

All Implemented Interfaces:

joelib.process.JOEProcess, joelib.util.PropertyAcceptor, java.io.Serializable

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public class DistanceCalculation

extends joelib.process.SimpleProcess

Calling processor classes if the filter rule fits.

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Field Summary
private  joelib.util.ComparisonHelper	comparison
private  double[]	distanceValues
private static org.apache.log4j.Category	logger           Obtain a suitable logger.

 

Fields inherited from class joelib.process.SimpleProcess

 

Constructor Summary

DistanceCalculation()           Constructor for the DescSelectionWriter object

 

Method Summary
boolean	clear()           Description of the Method
double[]	getDistanceValues()
java.util.Vector	getTargetMols()
void	init(joelib.util.ComparisonHelper _comparison)           Description of the Method
void	init(joelib.io.IOType inType, java.lang.String targetFile, java.lang.String descriptor)           Description of the Method
void	init(joelib.io.IOType inType, java.lang.String targetFile, java.lang.String[] descriptors)
void	init(joelib.molecule.JOEMol target, java.lang.String descriptor)
void	init(joelib.molecule.JOEMol target, java.lang.String[] descriptors)
joelib.util.JOEProperty[]	neededProperties()           Description of the Method
boolean	process(joelib.molecule.JOEMol mol, java.util.Map properties)           Description of the Method

 

Methods inherited from class joelib.process.SimpleProcess

acceptedProperties, getProcessInfo, setProcessInfo

 

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

 

Field Detail

logger

private static org.apache.log4j.Category logger

Obtain a suitable logger.

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comparison

private joelib.util.ComparisonHelper comparison

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distanceValues

private double[] distanceValues

Constructor Detail

DistanceCalculation

public DistanceCalculation()

Constructor for the DescSelectionWriter object

Method Detail

getTargetMols

public final java.util.Vector getTargetMols()

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getDistanceValues

public double[] getDistanceValues()

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clear

public boolean clear()

Description of the Method

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init

public void init(joelib.util.ComparisonHelper _comparison)

Description of the Method

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init

public void init(joelib.io.IOType inType,
                 java.lang.String targetFile,
                 java.lang.String descriptor)
          throws java.lang.Exception

Description of the Method

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init

public void init(joelib.io.IOType inType,
                 java.lang.String targetFile,
                 java.lang.String[] descriptors)
          throws java.lang.Exception

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init

public void init(joelib.molecule.JOEMol target,
                 java.lang.String descriptor)
          throws java.lang.Exception

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init

public void init(joelib.molecule.JOEMol target,
                 java.lang.String[] descriptors)
          throws java.lang.Exception

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neededProperties

public joelib.util.JOEProperty[] neededProperties()

Description of the Method

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process

public boolean process(joelib.molecule.JOEMol mol,
                       java.util.Map properties)
                throws joelib.process.JOEProcessException

Description of the Method

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Overview  Package   Class  Use  Deprecated  Index
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