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org.biomage.BioAssayData
Class QuantitationTypeDimension  

java.lang.Object
  org.biomage.Common.Extendable
      org.biomage.Common.Describable
          org.biomage.Common.Identifiable
              org.biomage.BioAssayData.QuantitationTypeDimension

All Implemented Interfaces:

org.biomage.Interface.HasAuditTrail, org.biomage.Interface.HasDescriptions, org.biomage.Interface.HasPropertySets, org.biomage.Interface.HasQuantitationTypes, org.biomage.Interface.HasSecurity, java.io.Serializable

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public class QuantitationTypeDimension

extends org.biomage.Common.Identifiable

implements java.io.Serializable, org.biomage.Interface.HasQuantitationTypes

An ordered list of quantitationTypes.

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Nested Class Summary

 

Nested classes inherited from class org.biomage.Interface.HasQuantitationTypes

org.biomage.Interface.HasQuantitationTypes.QuantitationTypes_list

 

Nested classes inherited from class org.biomage.Interface.HasAuditTrail

org.biomage.Interface.HasAuditTrail.AuditTrail_list

 

Nested classes inherited from class org.biomage.Interface.HasDescriptions

org.biomage.Interface.HasDescriptions.Descriptions_list

 

Nested classes inherited from class org.biomage.Interface.HasPropertySets

org.biomage.Interface.HasPropertySets.PropertySets_list

 

Field Summary
private  org.biomage.Interface.HasQuantitationTypes.QuantitationTypes_list	quantitationTypes           The QuantitationTypes for this Dimension.

 

Fields inherited from class org.biomage.Common.Identifiable

 

Fields inherited from class org.biomage.Common.Describable

 

Fields inherited from class org.biomage.Common.Extendable

 

Constructor Summary

QuantitationTypeDimension()           Default constructor.

QuantitationTypeDimension(org.xml.sax.Attributes atts)           Attribute constructor.

 

Method Summary
void	addToQuantitationTypes(int position, org.biomage.QuantitationType.QuantitationType quantitationType)           Method to add QuantitationType at position to QuantitationTypes_list
void	addToQuantitationTypes(org.biomage.QuantitationType.QuantitationType quantitationType)           Method to add QuantitationType to QuantitationTypes_list
org.biomage.QuantitationType.QuantitationType	getFromQuantitationTypes(int position)           Method to get QuantitationType from QuantitationTypes_list
org.biomage.Interface.HasQuantitationTypes.QuantitationTypes_list	getQuantitationTypes()           Get method for quantitationTypes
void	removeElementAtFromQuantitationTypes(int position)           Method to remove by position from QuantitationTypes_list
void	removeFromQuantitationTypes(org.biomage.QuantitationType.QuantitationType quantitationType)           Method to remove first QuantitationType from QuantitationTypes_list
void	setQuantitationTypes(org.biomage.Interface.HasQuantitationTypes.QuantitationTypes_list quantitationTypes)           Set method for quantitationTypes
void	writeAssociations(java.io.Writer out)           writeAssociations
void	writeAttributes(java.io.Writer out)           writeAttributes
void	writeMAGEML(java.io.Writer out)           writeMAGEML

 

Methods inherited from class org.biomage.Common.Identifiable

getIdentifier, getName, setIdentifier, setName

 

Methods inherited from class org.biomage.Common.Describable

addToAuditTrail, addToAuditTrail, addToDescriptions, addToDescriptions, getAuditTrail, getDescriptions, getFromAuditTrail, getFromDescriptions, getSecurity, removeElementAtFromAuditTrail, removeElementAtFromDescriptions, removeFromAuditTrail, removeFromDescriptions, setAuditTrail, setDescriptions, setSecurity

 

Methods inherited from class org.biomage.Common.Extendable

addToPropertySets, addToPropertySets, getFromPropertySets, getPropertySets, removeElementAtFromPropertySets, removeFromPropertySets, setPropertySets

 

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

 

Field Detail

quantitationTypes

private org.biomage.Interface.HasQuantitationTypes.QuantitationTypes_list quantitationTypes

The QuantitationTypes for this Dimension.

Constructor Detail

QuantitationTypeDimension

public QuantitationTypeDimension()

Default constructor.

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QuantitationTypeDimension

public QuantitationTypeDimension(org.xml.sax.Attributes atts)

Attribute constructor. Looks up the attributes in the parameter and casts them from strings appropriately

Method Detail

writeMAGEML

public void writeMAGEML(java.io.Writer out)
                 throws java.io.IOException

writeMAGEML

This method is responsible for assembling the attribute and association data into XML. It creates the object tag and then calls the writeAttributes and writeAssociation methods.

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writeAttributes

public void writeAttributes(java.io.Writer out)
                     throws java.io.IOException

writeAttributes

This method is responsible for assembling the attribute data into XML. It calls the super method to write out all attributes of this class and it's ancestors.

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writeAssociations

public void writeAssociations(java.io.Writer out)
                       throws java.io.IOException

writeAssociations

This method is responsible for assembling the association data into XML. It calls the super method to write out all associations of this class's ancestors.

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setQuantitationTypes

public void setQuantitationTypes(org.biomage.Interface.HasQuantitationTypes.QuantitationTypes_list quantitationTypes)

Set method for quantitationTypes

Specified by:

setQuantitationTypes in interface org.biomage.Interface.HasQuantitationTypes

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getQuantitationTypes

public org.biomage.Interface.HasQuantitationTypes.QuantitationTypes_list getQuantitationTypes()

Get method for quantitationTypes

Specified by:

getQuantitationTypes in interface org.biomage.Interface.HasQuantitationTypes

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addToQuantitationTypes

public void addToQuantitationTypes(org.biomage.QuantitationType.QuantitationType quantitationType)

Method to add QuantitationType to QuantitationTypes_list

Specified by:

addToQuantitationTypes in interface org.biomage.Interface.HasQuantitationTypes

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addToQuantitationTypes

public void addToQuantitationTypes(int position,
                                   org.biomage.QuantitationType.QuantitationType quantitationType)

Method to add QuantitationType at position to QuantitationTypes_list

Specified by:

addToQuantitationTypes in interface org.biomage.Interface.HasQuantitationTypes

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getFromQuantitationTypes

public org.biomage.QuantitationType.QuantitationType getFromQuantitationTypes(int position)

Method to get QuantitationType from QuantitationTypes_list

Specified by:

getFromQuantitationTypes in interface org.biomage.Interface.HasQuantitationTypes

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removeElementAtFromQuantitationTypes

public void removeElementAtFromQuantitationTypes(int position)

Method to remove by position from QuantitationTypes_list

Specified by:

removeElementAtFromQuantitationTypes in interface org.biomage.Interface.HasQuantitationTypes

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removeFromQuantitationTypes

public void removeFromQuantitationTypes(org.biomage.QuantitationType.QuantitationType quantitationType)

Method to remove first QuantitationType from QuantitationTypes_list

Specified by:

removeFromQuantitationTypes in interface org.biomage.Interface.HasQuantitationTypes

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Home >> All >> org >> biomage >> [ BioAssayData overview ]	PREV CLASS  NEXT CLASS
SUMMARY:  JAVADOC |  SOURCE |  DOWNLOAD | NESTED | FIELD | CONSTR | METHOD	DETAIL: FIELD | CONSTR | METHOD

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