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org.biomage.BioAssayData
Class ReporterDimension  

java.lang.Object
  org.biomage.Common.Extendable
      org.biomage.Common.Describable
          org.biomage.Common.Identifiable
              org.biomage.BioAssayData.DesignElementDimension
                  org.biomage.BioAssayData.ReporterDimension

All Implemented Interfaces:

org.biomage.Interface.HasAuditTrail, org.biomage.Interface.HasDescriptions, org.biomage.Interface.HasPropertySets, org.biomage.Interface.HasReporters, org.biomage.Interface.HasSecurity, java.io.Serializable

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public class ReporterDimension

extends DesignElementDimension

implements java.io.Serializable, org.biomage.Interface.HasReporters

Specialized DesignElementDimension to hold Reporters.

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Nested Class Summary

 

Nested classes inherited from class org.biomage.Interface.HasReporters

org.biomage.Interface.HasReporters.Reporters_list

 

Nested classes inherited from class org.biomage.Interface.HasAuditTrail

org.biomage.Interface.HasAuditTrail.AuditTrail_list

 

Nested classes inherited from class org.biomage.Interface.HasDescriptions

org.biomage.Interface.HasDescriptions.Descriptions_list

 

Nested classes inherited from class org.biomage.Interface.HasPropertySets

org.biomage.Interface.HasPropertySets.PropertySets_list

 

Field Summary
private  org.biomage.Interface.HasReporters.Reporters_list	reporters           The reporters for this dimension.

 

Fields inherited from class org.biomage.Common.Identifiable

 

Fields inherited from class org.biomage.Common.Describable

 

Fields inherited from class org.biomage.Common.Extendable

 

Constructor Summary

ReporterDimension()           Default constructor.

ReporterDimension(org.xml.sax.Attributes atts)           Attribute constructor.

 

Method Summary
void	addToReporters(int position, org.biomage.DesignElement.Reporter reporter)           Method to add Reporter at position to Reporters_list
void	addToReporters(org.biomage.DesignElement.Reporter reporter)           Method to add Reporter to Reporters_list
org.biomage.DesignElement.Reporter	getFromReporters(int position)           Method to get Reporter from Reporters_list
org.biomage.Interface.HasReporters.Reporters_list	getReporters()           Get method for reporters
void	removeElementAtFromReporters(int position)           Method to remove by position from Reporters_list
void	removeFromReporters(org.biomage.DesignElement.Reporter reporter)           Method to remove first Reporter from Reporters_list
void	setReporters(org.biomage.Interface.HasReporters.Reporters_list reporters)           Set method for reporters
void	writeAssociations(java.io.Writer out)           writeAssociations
void	writeAttributes(java.io.Writer out)           writeAttributes
void	writeMAGEML(java.io.Writer out)           writeMAGEML

 

Methods inherited from class org.biomage.Common.Identifiable

getIdentifier, getName, setIdentifier, setName

 

Methods inherited from class org.biomage.Common.Describable

addToAuditTrail, addToAuditTrail, addToDescriptions, addToDescriptions, getAuditTrail, getDescriptions, getFromAuditTrail, getFromDescriptions, getSecurity, removeElementAtFromAuditTrail, removeElementAtFromDescriptions, removeFromAuditTrail, removeFromDescriptions, setAuditTrail, setDescriptions, setSecurity

 

Methods inherited from class org.biomage.Common.Extendable

addToPropertySets, addToPropertySets, getFromPropertySets, getPropertySets, removeElementAtFromPropertySets, removeFromPropertySets, setPropertySets

 

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

 

Field Detail

reporters

private org.biomage.Interface.HasReporters.Reporters_list reporters

The reporters for this dimension.

Constructor Detail

ReporterDimension

public ReporterDimension()

Default constructor.

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ReporterDimension

public ReporterDimension(org.xml.sax.Attributes atts)

Attribute constructor. Looks up the attributes in the parameter and casts them from strings appropriately

Method Detail

writeMAGEML

public void writeMAGEML(java.io.Writer out)
                 throws java.io.IOException

writeMAGEML

This method is responsible for assembling the attribute and association data into XML. It creates the object tag and then calls the writeAttributes and writeAssociation methods.

Overrides:

writeMAGEML in class DesignElementDimension

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writeAttributes

public void writeAttributes(java.io.Writer out)
                     throws java.io.IOException

writeAttributes

This method is responsible for assembling the attribute data into XML. It calls the super method to write out all attributes of this class and it's ancestors.

Overrides:

writeAttributes in class DesignElementDimension

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writeAssociations

public void writeAssociations(java.io.Writer out)
                       throws java.io.IOException

writeAssociations

This method is responsible for assembling the association data into XML. It calls the super method to write out all associations of this class's ancestors.

Overrides:

writeAssociations in class DesignElementDimension

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setReporters

public void setReporters(org.biomage.Interface.HasReporters.Reporters_list reporters)

Set method for reporters

Specified by:

setReporters in interface org.biomage.Interface.HasReporters

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getReporters

public org.biomage.Interface.HasReporters.Reporters_list getReporters()

Get method for reporters

Specified by:

getReporters in interface org.biomage.Interface.HasReporters

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addToReporters

public void addToReporters(org.biomage.DesignElement.Reporter reporter)

Method to add Reporter to Reporters_list

Specified by:

addToReporters in interface org.biomage.Interface.HasReporters

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addToReporters

public void addToReporters(int position,
                           org.biomage.DesignElement.Reporter reporter)

Method to add Reporter at position to Reporters_list

Specified by:

addToReporters in interface org.biomage.Interface.HasReporters

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getFromReporters

public org.biomage.DesignElement.Reporter getFromReporters(int position)

Method to get Reporter from Reporters_list

Specified by:

getFromReporters in interface org.biomage.Interface.HasReporters

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removeElementAtFromReporters

public void removeElementAtFromReporters(int position)

Method to remove by position from Reporters_list

Specified by:

removeElementAtFromReporters in interface org.biomage.Interface.HasReporters

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removeFromReporters

public void removeFromReporters(org.biomage.DesignElement.Reporter reporter)

Method to remove first Reporter from Reporters_list

Specified by:

removeFromReporters in interface org.biomage.Interface.HasReporters

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Overview  Package   Class  Use  Deprecated  Index
Home >> All >> org >> biomage >> [ BioAssayData overview ]	PREV CLASS  NEXT CLASS
SUMMARY:  JAVADOC |  SOURCE |  DOWNLOAD | NESTED | FIELD | CONSTR | METHOD	DETAIL: FIELD | CONSTR | METHOD

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