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org.biomage.BioMaterial
Class BioMaterialMeasurement  

java.lang.Object
  org.biomage.Common.Extendable
      org.biomage.BioMaterial.BioMaterialMeasurement

All Implemented Interfaces:

org.biomage.Interface.HasBioMaterial, org.biomage.Interface.HasMeasurement, org.biomage.Interface.HasPropertySets, java.io.Serializable

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public class BioMaterialMeasurement

extends org.biomage.Common.Extendable

implements java.io.Serializable, org.biomage.Interface.HasBioMaterial, org.biomage.Interface.HasMeasurement

A BioMaterialMeasurement is a pairing of a source BioMaterial and an amount (Measurement) of that BioMaterial.

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Nested Class Summary

 

Nested classes inherited from class org.biomage.Interface.HasPropertySets

org.biomage.Interface.HasPropertySets.PropertySets_list

 

Field Summary
private  BioMaterial	bioMaterial           A source BioMaterial for a treatment.
private  org.biomage.Measurement.Measurement	measurement           The amount of the BioMaterial.

 

Fields inherited from class org.biomage.Common.Extendable

 

Constructor Summary

BioMaterialMeasurement()           Default constructor.

BioMaterialMeasurement(org.xml.sax.Attributes atts)           Attribute constructor.

 

Method Summary
BioMaterial	getBioMaterial()           Get method for bioMaterial
org.biomage.Measurement.Measurement	getMeasurement()           Get method for measurement
void	setBioMaterial(BioMaterial bioMaterial)           Set method for bioMaterial
void	setMeasurement(org.biomage.Measurement.Measurement measurement)           Set method for measurement
void	writeAssociations(java.io.Writer out)           writeAssociations
void	writeAttributes(java.io.Writer out)           writeAttributes
void	writeMAGEML(java.io.Writer out)           writeMAGEML

 

Methods inherited from class org.biomage.Common.Extendable

addToPropertySets, addToPropertySets, getFromPropertySets, getPropertySets, removeElementAtFromPropertySets, removeFromPropertySets, setPropertySets

 

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

 

Field Detail

bioMaterial

private BioMaterial bioMaterial

A source BioMaterial for a treatment.

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measurement

private org.biomage.Measurement.Measurement measurement

The amount of the BioMaterial.

Constructor Detail

BioMaterialMeasurement

public BioMaterialMeasurement()

Default constructor.

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BioMaterialMeasurement

public BioMaterialMeasurement(org.xml.sax.Attributes atts)

Attribute constructor. Looks up the attributes in the parameter and casts them from strings appropriately

Method Detail

writeMAGEML

public void writeMAGEML(java.io.Writer out)
                 throws java.io.IOException

writeMAGEML

This method is responsible for assembling the attribute and association data into XML. It creates the object tag and then calls the writeAttributes and writeAssociation methods.

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writeAttributes

public void writeAttributes(java.io.Writer out)
                     throws java.io.IOException

writeAttributes

This method is responsible for assembling the attribute data into XML. It calls the super method to write out all attributes of this class and it's ancestors.

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writeAssociations

public void writeAssociations(java.io.Writer out)
                       throws java.io.IOException

writeAssociations

This method is responsible for assembling the association data into XML. It calls the super method to write out all associations of this class's ancestors.

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setBioMaterial

public void setBioMaterial(BioMaterial bioMaterial)

Set method for bioMaterial

Specified by:

setBioMaterial in interface org.biomage.Interface.HasBioMaterial

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getBioMaterial

public BioMaterial getBioMaterial()

Get method for bioMaterial

Specified by:

getBioMaterial in interface org.biomage.Interface.HasBioMaterial

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setMeasurement

public void setMeasurement(org.biomage.Measurement.Measurement measurement)

Set method for measurement

Specified by:

setMeasurement in interface org.biomage.Interface.HasMeasurement

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getMeasurement

public org.biomage.Measurement.Measurement getMeasurement()

Get method for measurement

Specified by:

getMeasurement in interface org.biomage.Interface.HasMeasurement

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Overview  Package   Class  Use  Deprecated  Index
Home >> All >> org >> biomage >> [ BioMaterial overview ]	PREV CLASS  NEXT CLASS
SUMMARY:  JAVADOC |  SOURCE |  DOWNLOAD | NESTED | FIELD | CONSTR | METHOD	DETAIL: FIELD | CONSTR | METHOD

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