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org.biomage.Protocol
Class SoftwareApplication  

java.lang.Object
  org.biomage.Common.Extendable
      org.biomage.Common.Describable
          org.biomage.Protocol.ParameterizableApplication
              org.biomage.Protocol.SoftwareApplication

All Implemented Interfaces:

org.biomage.Interface.HasAuditTrail, org.biomage.Interface.HasDescriptions, org.biomage.Interface.HasParameterValues, org.biomage.Interface.HasPropertySets, org.biomage.Interface.HasSecurity, org.biomage.Interface.HasSoftware, java.io.Serializable

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public class SoftwareApplication

extends ParameterizableApplication

implements java.io.Serializable, org.biomage.Interface.HasSoftware

The use of a piece of software with the requisite Parameters and ParameterValues.

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Nested Class Summary

 

Nested classes inherited from class org.biomage.Interface.HasParameterValues

org.biomage.Interface.HasParameterValues.ParameterValues_list

 

Nested classes inherited from class org.biomage.Interface.HasAuditTrail

org.biomage.Interface.HasAuditTrail.AuditTrail_list

 

Nested classes inherited from class org.biomage.Interface.HasDescriptions

org.biomage.Interface.HasDescriptions.Descriptions_list

 

Nested classes inherited from class org.biomage.Interface.HasPropertySets

org.biomage.Interface.HasPropertySets.PropertySets_list

 

Field Summary
(package private)  java.util.Date	releaseDate           When the software was released.
private  Software	software           The underlying software.
(package private)  java.lang.String	version           The version of the software.

 

Fields inherited from class org.biomage.Protocol.ParameterizableApplication

 

Fields inherited from class org.biomage.Common.Describable

 

Fields inherited from class org.biomage.Common.Extendable

 

Constructor Summary

SoftwareApplication()           Default constructor.

SoftwareApplication(org.xml.sax.Attributes atts)           Attribute constructor.

 

Method Summary
java.util.Date	getReleaseDate()           Get method for releaseDate
Software	getSoftware()           Get method for software
java.lang.String	getVersion()           Get method for version
void	setReleaseDate(java.util.Date releaseDate)           Set method for releaseDate
void	setSoftware(Software software)           Set method for software
void	setVersion(java.lang.String version)           Set method for version
void	writeAssociations(java.io.Writer out)           writeAssociations
void	writeAttributes(java.io.Writer out)           writeAttributes
void	writeMAGEML(java.io.Writer out)           writeMAGEML

 

Methods inherited from class org.biomage.Protocol.ParameterizableApplication

addToParameterValues, addToParameterValues, getFromParameterValues, getParameterValues, removeElementAtFromParameterValues, removeFromParameterValues, setParameterValues

 

Methods inherited from class org.biomage.Common.Describable

addToAuditTrail, addToAuditTrail, addToDescriptions, addToDescriptions, getAuditTrail, getDescriptions, getFromAuditTrail, getFromDescriptions, getSecurity, removeElementAtFromAuditTrail, removeElementAtFromDescriptions, removeFromAuditTrail, removeFromDescriptions, setAuditTrail, setDescriptions, setSecurity

 

Methods inherited from class org.biomage.Common.Extendable

addToPropertySets, addToPropertySets, getFromPropertySets, getPropertySets, removeElementAtFromPropertySets, removeFromPropertySets, setPropertySets

 

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

 

Field Detail

version

java.lang.String version

The version of the software.

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releaseDate

java.util.Date releaseDate

When the software was released.

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software

private Software software

The underlying software.

Constructor Detail

SoftwareApplication

public SoftwareApplication()

Default constructor.

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SoftwareApplication

public SoftwareApplication(org.xml.sax.Attributes atts)

Attribute constructor. Looks up the attributes in the parameter and casts them from strings appropriately

Method Detail

writeMAGEML

public void writeMAGEML(java.io.Writer out)
                 throws java.io.IOException

writeMAGEML

This method is responsible for assembling the attribute and association data into XML. It creates the object tag and then calls the writeAttributes and writeAssociation methods.

Overrides:

writeMAGEML in class ParameterizableApplication

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writeAttributes

public void writeAttributes(java.io.Writer out)
                     throws java.io.IOException

writeAttributes

This method is responsible for assembling the attribute data into XML. It calls the super method to write out all attributes of this class and it's ancestors.

Overrides:

writeAttributes in class ParameterizableApplication

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writeAssociations

public void writeAssociations(java.io.Writer out)
                       throws java.io.IOException

writeAssociations

This method is responsible for assembling the association data into XML. It calls the super method to write out all associations of this class's ancestors.

Overrides:

writeAssociations in class ParameterizableApplication

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setVersion

public void setVersion(java.lang.String version)

Set method for version

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getVersion

public java.lang.String getVersion()

Get method for version

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setReleaseDate

public void setReleaseDate(java.util.Date releaseDate)

Set method for releaseDate

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getReleaseDate

public java.util.Date getReleaseDate()

Get method for releaseDate

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setSoftware

public void setSoftware(Software software)

Set method for software

Specified by:

setSoftware in interface org.biomage.Interface.HasSoftware

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getSoftware

public Software getSoftware()

Get method for software

Specified by:

getSoftware in interface org.biomage.Interface.HasSoftware

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Overview  Package   Class  Use  Deprecated  Index
Home >> All >> org >> biomage >> [ Protocol overview ]	PREV CLASS  NEXT CLASS
SUMMARY:  JAVADOC |  SOURCE |  DOWNLOAD | NESTED | FIELD | CONSTR | METHOD	DETAIL: FIELD | CONSTR | METHOD

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