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B
- bodyIndent - Static variable in class org.biomage.tools.generate_cpp.CreateCPPFile
C
- CreateCPPFile - class org.biomage.tools.generate_cpp.CreateCPPFile.
- CreateCPPFile() - Constructor for class org.biomage.tools.generate_cpp.CreateCPPFile
- CreateCPPFile.AssignmentWriter - class org.biomage.tools.generate_cpp.CreateCPPFile.AssignmentWriter.
- Description: Writes the Assignment operator to the CPP file.
- CreateCPPFile.AssignmentWriter(FileWriter, CreateFile) - Constructor for class org.biomage.tools.generate_cpp.CreateCPPFile.AssignmentWriter
- CreateCPPFile.ClassDeclWriter - class org.biomage.tools.generate_cpp.CreateCPPFile.ClassDeclWriter.
- Description: Writes the class declaration out to the file.
- CreateCPPFile.ClassDeclWriter(FileWriter) - Constructor for class org.biomage.tools.generate_cpp.CreateCPPFile.ClassDeclWriter
- CreateCPPFile.ConstructorBodyWriter - class org.biomage.tools.generate_cpp.CreateCPPFile.ConstructorBodyWriter.
- Description: Writes the copy constructor body needed into the CPP file.
- CreateCPPFile.ConstructorBodyWriter(FileWriter) - Constructor for class org.biomage.tools.generate_cpp.CreateCPPFile.ConstructorBodyWriter
- CreateCPPFile.ConstructorWriter - class org.biomage.tools.generate_cpp.CreateCPPFile.ConstructorWriter.
- Description: Writes the copy constructor header needed into the CPP file.
- CreateCPPFile.ConstructorWriter(FileWriter, CreateFile) - Constructor for class org.biomage.tools.generate_cpp.CreateCPPFile.ConstructorWriter
- CreateCPPFile.DataMemberWriter - class org.biomage.tools.generate_cpp.CreateCPPFile.DataMemberWriter.
- Description: Writes out the data members of the Class in the Header File.
- CreateCPPFile.DataMemberWriter(FileWriter) - Constructor for class org.biomage.tools.generate_cpp.CreateCPPFile.DataMemberWriter
- CreateCPPFile.EquivalenceWriter - class org.biomage.tools.generate_cpp.CreateCPPFile.EquivalenceWriter.
- Description: Writes the =='s operator to the CPP file.
- CreateCPPFile.EquivalenceWriter(FileWriter, CreateFile) - Constructor for class org.biomage.tools.generate_cpp.CreateCPPFile.EquivalenceWriter
- CreateCPPFile.GetAndSetWriter - class org.biomage.tools.generate_cpp.CreateCPPFile.GetAndSetWriter.
- Description: Writes the attribute set and get methods to the C++ header file.
- CreateCPPFile.GetAndSetWriter(FileWriter) - Constructor for class org.biomage.tools.generate_cpp.CreateCPPFile.GetAndSetWriter
- CreateCPPFile.ImportWriter - class org.biomage.tools.generate_cpp.CreateCPPFile.ImportWriter.
- Description: Writes the correct includes needed in the header files.
- CreateCPPFile.ImportWriter(FileWriter, CreateFile) - Constructor for class org.biomage.tools.generate_cpp.CreateCPPFile.ImportWriter
- CreateCPPFile.IncludeWriter - class org.biomage.tools.generate_cpp.CreateCPPFile.IncludeWriter.
- Description: Writes the includes that we need into the CPP file.
- CreateCPPFile.IncludeWriter(FileWriter) - Constructor for class org.biomage.tools.generate_cpp.CreateCPPFile.IncludeWriter
- CreateCPPFile.RemoveFromWriter - class org.biomage.tools.generate_cpp.CreateCPPFile.RemoveFromWriter.
- Description: Writes the RemoveFrom function to the CPP file.
- CreateCPPFile.RemoveFromWriter(FileWriter) - Constructor for class org.biomage.tools.generate_cpp.CreateCPPFile.RemoveFromWriter
- CreateCPPFile.TemplateWriter - class org.biomage.tools.generate_cpp.CreateCPPFile.TemplateWriter.
- Description: Writes the correct template needed in the header files.
- CreateCPPFile.TemplateWriter(FileWriter, CreateFile) - Constructor for class org.biomage.tools.generate_cpp.CreateCPPFile.TemplateWriter
- CreateCPPFile.specificWriter - class org.biomage.tools.generate_cpp.CreateCPPFile.specificWriter.
- Description: An abstract class used to in conjuction with the LoopNames function that reads through all the attributes and assocations.
- CreateCPPFile.specificWriter() - Constructor for class org.biomage.tools.generate_cpp.CreateCPPFile.specificWriter
- conref(String) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile
- conrefVectorize(String, boolean) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile
- context() - Method in class org.biomage.tools.generate_cpp.CreateCPPFile
D
- dAgg(CreateFile.AssociationAttrInformation) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile
- doAssocations() - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.AssignmentWriter
- doAssocations() - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.ConstructorBodyWriter
- doAssocations() - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.ConstructorWriter
- doAssocations() - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.DataMemberWriter
- doAssocations() - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.EquivalenceWriter
- doAssocations() - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.GetAndSetWriter
- doAssocations() - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.ImportWriter
- doAssocations() - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.IncludeWriter
- doAssocations() - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.RemoveFromWriter
- doAssocations() - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.TemplateWriter
- doAssocations() - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.specificWriter
- doAttrs() - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.AssignmentWriter
- doAttrs() - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.ClassDeclWriter
- doAttrs() - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.ConstructorWriter
- doAttrs() - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.DataMemberWriter
- doAttrs() - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.EquivalenceWriter
- doAttrs() - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.GetAndSetWriter
- doAttrs() - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.ImportWriter
- doAttrs() - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.specificWriter
- doBase() - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.AssignmentWriter
- doBase() - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.ConstructorWriter
- doBase() - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.ImportWriter
- doBase() - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.specificWriter
F
- fixDataType(CreateFile.AttrInformation) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile
G
- GetMeth(String) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile
H
- handleEnd(boolean) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.ConstructorWriter
- handleEnd(boolean) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.EquivalenceWriter
I
- indent(int) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile
- initialCap(String) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile
L
- LoopNames(CreateFile, CreateCPPFile.specificWriter) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile
- Description: Loops through the Attributes and Associations so that we can write based on context.
N
- NEWLINE - Static variable in class org.biomage.tools.generate_cpp.CreateCPPFile
- Description: The environment specific new line.
O
- oneIndent - Static variable in class org.biomage.tools.generate_cpp.CreateCPPFile
- Description: Size of indentation.
- org.biomage.tools.generate_cpp - package org.biomage.tools.generate_cpp
P
- packageName() - Method in class org.biomage.tools.generate_cpp.CreateCPPFile
- param(String) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile
- printCPPClassFile(CreateFile, String, String, File, String, String) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile
- Description: From the parsed information creates the file itself.
- printCPPClassImpl(CreateFile, String, String, File, String) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile
- Description: This Method creates the CPP implementation file.
Q
- quote(String) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile
R
- ref(String) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile
S
- Scope(String) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile
- SetMeth(String) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile
- smartPointer(CreateFile.AssociationAttrInformation, boolean) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile
T
- thePackageName - Variable in class org.biomage.tools.generate_cpp.CreateCPPFile
- the_indent - Variable in class org.biomage.tools.generate_cpp.CreateCPPFile.ConstructorBodyWriter
V
- varit(String) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile
- vectorize(String, boolean) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile
W
- wrapString(String, int, int) - Static method in class org.biomage.tools.generate_cpp.CreateCPPFile
- Description: Takes the input string and breaks it into appropriate sized pieces.
- writeAssoc(CreateFile, CreateFile.AssociationAttrInformation, boolean) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.AssignmentWriter
- writeAssoc(CreateFile, CreateFile.AssociationAttrInformation, boolean) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.ConstructorBodyWriter
- writeAssoc(CreateFile, CreateFile.AssociationAttrInformation, boolean) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.ConstructorWriter
- writeAssoc(CreateFile, CreateFile.AssociationAttrInformation, boolean) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.DataMemberWriter
- writeAssoc(CreateFile, CreateFile.AssociationAttrInformation, boolean) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.EquivalenceWriter
- writeAssoc(CreateFile, CreateFile.AssociationAttrInformation, boolean) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.GetAndSetWriter
- writeAssoc(CreateFile, CreateFile.AssociationAttrInformation, boolean) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.ImportWriter
- writeAssoc(CreateFile, CreateFile.AssociationAttrInformation, boolean) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.IncludeWriter
- writeAssoc(CreateFile, CreateFile.AssociationAttrInformation, boolean) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.RemoveFromWriter
- writeAssoc(CreateFile, CreateFile.AssociationAttrInformation, boolean) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.TemplateWriter
- writeAssoc(CreateFile, CreateFile.AssociationAttrInformation, boolean) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.specificWriter
- writeAssocComment(CreateFile) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.DataMemberWriter
- writeAssocComment(CreateFile) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.GetAndSetWriter
- writeAssocComment(CreateFile) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.specificWriter
- writeAttr(CreateFile, CreateFile.AttrInformation, boolean) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.AssignmentWriter
- writeAttr(CreateFile, CreateFile.AttrInformation, boolean) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.ClassDeclWriter
- writeAttr(CreateFile, CreateFile.AttrInformation, boolean) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.ConstructorWriter
- writeAttr(CreateFile, CreateFile.AttrInformation, boolean) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.DataMemberWriter
- writeAttr(CreateFile, CreateFile.AttrInformation, boolean) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.EquivalenceWriter
- writeAttr(CreateFile, CreateFile.AttrInformation, boolean) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.GetAndSetWriter
- writeAttr(CreateFile, CreateFile.AttrInformation, boolean) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.ImportWriter
- writeAttr(CreateFile, CreateFile.AttrInformation, boolean) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.specificWriter
- writeAttrComment(CreateFile) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.DataMemberWriter
- writeAttrComment(CreateFile) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.GetAndSetWriter
- writeAttrComment(CreateFile) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.specificWriter
- writeBase(CreateFile, String, boolean) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.AssignmentWriter
- writeBase(CreateFile, String, boolean) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.ConstructorWriter
- writeBase(CreateFile, String, boolean) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.ImportWriter
- writeBase(CreateFile, String, boolean) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.specificWriter
- writeBaseComment(CreateFile) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile.specificWriter
- writeBigHeaders(String, String, File, Vector, String, String) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile
- Description: Writes all the header files into a standard include so that we can access them in mass.
- writeCPPClassDecl(CreateFile, FileWriter) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile
- Description: Writes the CPP class declaration out to the Header file.
- writeCPPComment(CreateFile, FileWriter, String, int, String, boolean, boolean) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile
- Description: Takes the comment, formats it for C++ and outputs it.
- writeCPPCommon(CreateFile, FileWriter) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile
- Description: Writes the common methods, common to all the CPP class Header files.
- writeExceptionClass(String, String, File, File, String) - Method in class org.biomage.tools.generate_cpp.CreateCPPFile
- Description: Writes the exception class template out to a file.
- writer - Variable in class org.biomage.tools.generate_cpp.CreateCPPFile.ClassDeclWriter
- writer - Variable in class org.biomage.tools.generate_cpp.CreateCPPFile.ConstructorBodyWriter
- writer - Variable in class org.biomage.tools.generate_cpp.CreateCPPFile.ConstructorWriter
- writer - Variable in class org.biomage.tools.generate_cpp.CreateCPPFile.DataMemberWriter
- writer - Variable in class org.biomage.tools.generate_cpp.CreateCPPFile.EquivalenceWriter
- writer - Variable in class org.biomage.tools.generate_cpp.CreateCPPFile.GetAndSetWriter
- writer - Variable in class org.biomage.tools.generate_cpp.CreateCPPFile.ImportWriter
- writer - Variable in class org.biomage.tools.generate_cpp.CreateCPPFile.IncludeWriter
- writer - Variable in class org.biomage.tools.generate_cpp.CreateCPPFile.RemoveFromWriter
- writer - Variable in class org.biomage.tools.generate_cpp.CreateCPPFile.TemplateWriter
- wroteany - Variable in class org.biomage.tools.generate_cpp.CreateCPPFile.ImportWriter
- wrotesome - Variable in class org.biomage.tools.generate_cpp.CreateCPPFile.EquivalenceWriter
B C D F G H I L N O P Q R S T V W
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