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SUMMARY: JavaDoc of org.xmlcml.cml.AbstractBond JAVADOC | Sourc code of org.xmlcml.cml.AbstractBond SOURCE | Download org.xmlcml.cml.AbstractBond DOWNLOAD | NESTED | FIELD | CONSTR | METHOD DETAIL: FIELD | CONSTR | METHOD

org.xmlcml.cml
Interface AbstractBond  view AbstractBond download AbstractBond.java

All Superinterfaces:
AbstractBase, AbstractBuiltinContainer, AttributeAtomRefs, AttributeConvention, AttributeDictRef, AttributeId, AttributeTitle, BuiltinContainer, org.w3c.dom.Element, org.w3c.dom.Node
All Known Subinterfaces:
CMLBond, CMLBondArray
public interface AbstractBond
extends AbstractBuiltinContainer, AttributeAtomRefs

base class for Bond-based classes. Mainly declares static variables

Field Summary
static java.lang.String AROMATIC
          aromatic bond
static int ATOMREF
           
static java.lang.String ATOMREF_NAME
           
static int ATOMREFS
           
static java.lang.String ATOMREFS_NAME
           
static int BOND_BUILTIN_COUNT
           
static int BOND_FLOATVAL_COUNT
           
static int BOND_FLOATVAL_END
           
static int BOND_FLOATVAL_START
           
static int BOND_INTEGERVAL_COUNT
           
static int BOND_INTEGERVAL_END
           
static int BOND_INTEGERVAL_START
           
static int BOND_STRINGVAL_COUNT
           
static int BOND_STRINGVAL_END
           
static int BOND_STRINGVAL_START
           
static int BONDID
           
static double[] bondOrders
           
static java.lang.String[] bondTypeStrings
           
static java.lang.String[] builtinFloatValNames
           
static java.lang.String[] builtinIntegerValNames
           
static java.lang.String[] builtinStringValNames
           
static java.lang.String CIS
          cis bond
static java.lang.String DECREASE
           
static double DEFAULTXY2LENGTH
          default screen bondlength
static double DEFAULTXYZ3LENGTH
          default 3d bondlength
static java.lang.String DELETE
           
static java.lang.String DOUBLE
          double bond
static java.lang.String HATCH
          hatch bond
static java.lang.String ID_NAME
           
static java.lang.String INCREASE
           
static int LENGTH
           
static java.lang.String LENGTH_NAME
           
static java.lang.String NOSTEREO
          nostereo bond
static int ORDER
           
static java.lang.String ORDER_NAME
           
static java.lang.String OVERRUN
           
static java.lang.String SINGLE
          single bond
static int STEREO
           
static java.lang.String STEREO_NAME
           
static java.lang.String TRANS
          trans bond
static java.lang.String TRIPLE
          triple bond
static java.lang.String UNKNOWN
          unspecified bond
static java.lang.String WEDGE
          wedge bond
static java.lang.String ZERO
          zero bond (disjoint == "." in SMILES)
 
Fields inherited from interface org.xmlcml.cml.AbstractBuiltinContainer
NONUNIQUE, STEREO_2D, STEREO_3D, STEREO_ANY, UNIQUE
 
Fields inherited from interface org.xmlcml.cml.AbstractBase
ANGLE, ATOM, ATOMARRAY, ATOMPARITY, BOND, BONDARRAY, BONDSTEREO, BUILTIN, CML, CML_PREFIX, CRYSTAL, ELECTRON, ELEMENT_COUNT, ELEMENT_NAMES, EXECUTE, FEATURE, FLOAT, FLOAT_TYPE, FLOATARRAY, FLOATMATRIX, FORMULA, INTEGER, INTEGER_TYPE, INTEGERARRAY, LINK, LIST, MOLECULE, NAMESPACE_URI, PACKAGE_NAME, REACTION, SEQUENCE, STRING, STRING_TYPE, STRINGARRAY, TORSION, UNK, UNK_ELEM
 
Fields inherited from interface org.w3c.dom.Node
ATTRIBUTE_NODE, CDATA_SECTION_NODE, COMMENT_NODE, DOCUMENT_FRAGMENT_NODE, DOCUMENT_NODE, DOCUMENT_POSITION_CONTAINED_BY, DOCUMENT_POSITION_CONTAINS, DOCUMENT_POSITION_DISCONNECTED, DOCUMENT_POSITION_FOLLOWING, DOCUMENT_POSITION_IMPLEMENTATION_SPECIFIC, DOCUMENT_POSITION_PRECEDING, DOCUMENT_TYPE_NODE, ELEMENT_NODE, ENTITY_NODE, ENTITY_REFERENCE_NODE, NOTATION_NODE, PROCESSING_INSTRUCTION_NODE, TEXT_NODE
 
Fields inherited from interface org.xmlcml.cml.AttributeTitle
TITLE
 
Fields inherited from interface org.xmlcml.cml.AttributeDictRef
DICTREF
 
Fields inherited from interface org.xmlcml.cml.AttributeId
ID
 
Fields inherited from interface org.xmlcml.cml.AttributeConvention
CONVENTION
 
Fields inherited from interface org.xmlcml.cml.AttributeAtomRefs
ATOM_REFS
 
Methods inherited from interface org.xmlcml.cml.AbstractBuiltinContainer
addBuiltinChildWithFloatValue, addBuiltinChildWithIntegerValue, addBuiltinChildWithStringValue, checkBuiltins, deleteNonBuiltinVal, getBuiltinChild, getBuiltinChildElements, getBuiltinChildFloatValue, getBuiltinChildIntegerValue, getBuiltinChildStringValue, getBuiltinCount, getBuiltinVal, getNonBuiltinVal, removeBuiltinChild, setBuiltinFloatChild, setBuiltinIntegerChild, setBuiltinStringChild, setBuiltinVal, setNonBuiltinVal
 
Methods inherited from interface org.xmlcml.cml.AbstractBase
addTracer, debug, debug, getDisplay, processDOM, readXMLTest, removeTracer, setDOMNeedsProcessing, setDOMNeedsUpdating, updateDOM
 
Methods inherited from interface org.w3c.dom.Element
getAttribute, getAttributeNode, getAttributeNodeNS, getAttributeNS, getElementsByTagName, getElementsByTagNameNS, getSchemaTypeInfo, getTagName, hasAttribute, hasAttributeNS, removeAttribute, removeAttributeNode, removeAttributeNS, setAttribute, setAttributeNode, setAttributeNodeNS, setAttributeNS, setIdAttribute, setIdAttributeNode, setIdAttributeNS
 
Methods inherited from interface org.w3c.dom.Node
appendChild, cloneNode, compareDocumentPosition, getAttributes, getBaseURI, getChildNodes, getFeature, getFirstChild, getLastChild, getLocalName, getNamespaceURI, getNextSibling, getNodeName, getNodeType, getNodeValue, getOwnerDocument, getParentNode, getPrefix, getPreviousSibling, getTextContent, getUserData, hasAttributes, hasChildNodes, insertBefore, isDefaultNamespace, isEqualNode, isSameNode, isSupported, lookupNamespaceURI, lookupPrefix, normalize, removeChild, replaceChild, setNodeValue, setPrefix, setTextContent, setUserData
 
Methods inherited from interface org.xmlcml.cml.AttributeTitle
getTitle, processDOMHasTitle, setTitle, updateDOMHasTitle
 
Methods inherited from interface org.xmlcml.cml.AttributeDictRef
getDictRef, processDOMHasDictRef, setDictRef, updateDOMHasDictRef
 
Methods inherited from interface org.xmlcml.cml.AttributeId
getId, processDOMHasId, setId, updateDOMHasId
 
Methods inherited from interface org.xmlcml.cml.AttributeConvention
getConventionName, processDOMHasConvention, setConventionName, updateDOMHasConvention
 
Methods inherited from interface org.xmlcml.cml.AttributeAtomRefs
addAtomRef, deleteAtomRef, getAtomRef, getAtomRefVector, getMolecule, processDOMHasAtomRefs, updateDOMHasAtomRefs
 

Field Detail

BOND_FLOATVAL_START

public static final int BOND_FLOATVAL_START
See Also:
Constant Field Values

LENGTH

public static final int LENGTH
See Also:
Constant Field Values

BOND_FLOATVAL_END

public static final int BOND_FLOATVAL_END
See Also:
Constant Field Values

BOND_FLOATVAL_COUNT

public static final int BOND_FLOATVAL_COUNT
See Also:
Constant Field Values

BOND_INTEGERVAL_START

public static final int BOND_INTEGERVAL_START
See Also:
Constant Field Values

BOND_INTEGERVAL_END

public static final int BOND_INTEGERVAL_END
See Also:
Constant Field Values

BOND_INTEGERVAL_COUNT

public static final int BOND_INTEGERVAL_COUNT
See Also:
Constant Field Values

BOND_STRINGVAL_START

public static final int BOND_STRINGVAL_START
See Also:
Constant Field Values

ATOMREF

public static final int ATOMREF
See Also:
Constant Field Values

ATOMREFS

public static final int ATOMREFS
See Also:
Constant Field Values

ORDER

public static final int ORDER
See Also:
Constant Field Values

STEREO

public static final int STEREO
See Also:
Constant Field Values

BONDID

public static final int BONDID
See Also:
Constant Field Values

BOND_STRINGVAL_END

public static final int BOND_STRINGVAL_END
See Also:
Constant Field Values

BOND_STRINGVAL_COUNT

public static final int BOND_STRINGVAL_COUNT
See Also:
Constant Field Values

BOND_BUILTIN_COUNT

public static final int BOND_BUILTIN_COUNT
See Also:
Constant Field Values

LENGTH_NAME

public static final java.lang.String LENGTH_NAME
See Also:
Constant Field Values

builtinFloatValNames

public static final java.lang.String[] builtinFloatValNames

builtinIntegerValNames

public static final java.lang.String[] builtinIntegerValNames

ATOMREF_NAME

public static final java.lang.String ATOMREF_NAME
See Also:
Constant Field Values

ATOMREFS_NAME

public static final java.lang.String ATOMREFS_NAME
See Also:
Constant Field Values

ORDER_NAME

public static final java.lang.String ORDER_NAME
See Also:
Constant Field Values

STEREO_NAME

public static final java.lang.String STEREO_NAME
See Also:
Constant Field Values

ID_NAME

public static final java.lang.String ID_NAME
See Also:
Constant Field Values

builtinStringValNames

public static final java.lang.String[] builtinStringValNames

DEFAULTXY2LENGTH

public static final double DEFAULTXY2LENGTH
default screen bondlength

See Also:
Constant Field Values

DEFAULTXYZ3LENGTH

public static final double DEFAULTXYZ3LENGTH
default 3d bondlength

See Also:
Constant Field Values

UNKNOWN

public static final java.lang.String UNKNOWN
unspecified bond

See Also:
Constant Field Values

SINGLE

public static final java.lang.String SINGLE
single bond

See Also:
Constant Field Values

DOUBLE

public static final java.lang.String DOUBLE
double bond

See Also:
Constant Field Values

TRIPLE

public static final java.lang.String TRIPLE
triple bond

See Also:
Constant Field Values

AROMATIC

public static final java.lang.String AROMATIC
aromatic bond

See Also:
Constant Field Values

ZERO

public static final java.lang.String ZERO
zero bond (disjoint == "." in SMILES)

See Also:
Constant Field Values

WEDGE

public static final java.lang.String WEDGE
wedge bond

See Also:
Constant Field Values

HATCH

public static final java.lang.String HATCH
hatch bond

See Also:
Constant Field Values

CIS

public static final java.lang.String CIS
cis bond

See Also:
Constant Field Values

TRANS

public static final java.lang.String TRANS
trans bond

See Also:
Constant Field Values

NOSTEREO

public static final java.lang.String NOSTEREO
nostereo bond

See Also:
Constant Field Values

DELETE

public static final java.lang.String DELETE
See Also:
Constant Field Values

OVERRUN

public static final java.lang.String OVERRUN
See Also:
Constant Field Values

INCREASE

public static final java.lang.String INCREASE
See Also:
Constant Field Values

DECREASE

public static final java.lang.String DECREASE
See Also:
Constant Field Values

bondTypeStrings

public static final java.lang.String[] bondTypeStrings

bondOrders

public static final double[] bondOrders
Overview  Package   Class  Use  Deprecated  Index 
Home >> All >> org >> xmlcml >> [ cml overview ]  PREV CLASS  NEXT CLASS
SUMMARY: JavaDoc of org.xmlcml.cml.AbstractBond JAVADOC | Sourc code of org.xmlcml.cml.AbstractBond SOURCE | Download org.xmlcml.cml.AbstractBond DOWNLOAD | NESTED | FIELD | CONSTR | METHOD DETAIL: FIELD | CONSTR | METHOD