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Uses of Package
org.xmlcml.cml
| Classes in org.xmlcml.cml used by org.xmlcml.cml | |
| AbstractAngle
forces subclasses to implement AngleUnits |
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| AbstractAtom
Base class for atomic information . |
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| AbstractAtomRef
some Objects (CMLAngle, CMLTorsion...) have references to Atoms. |
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| AbstractBase
The base class for all elementObjects mentioned in the CML DTD. |
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| AbstractBond
base class for Bond-based classes. |
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| AbstractBuiltinContainer
supports methods for getting and setting builtin child values. |
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| AbstractNumericVal
supports a number (either Float or Integer). |
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| AbstractStringVal
superclass of all interfaces which hold and manipulate strig values (which includes numeric values) |
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| AttributeAtomRefs
some Objects (e.g. |
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| AttributeConvention
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| AttributeCount
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| AttributeDictRef
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| AttributeId
identifies and supports those elements which can have id attributes |
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| AttributeSize
the size attribute is optional and gives the numebr of elements in an array. |
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| AttributeTitle
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| AttributeUnits
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| BuiltinArrayContainer
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| BuiltinContainer
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| CMLAngle
CORE Interface DTD Class supports angle element in CML DTD. |
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| CMLAtom
CORE Interface DTD Class Supports <atom> elements |
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| CMLAtomArray
DTD Class this interface is only used if AtomArrays are stored as such in the DOM . |
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| CMLAtomFactory
Creates CMLAtom of appropriate subclass |
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| CMLAtomParity
CORE Interface DTD Class interface supporting atom-based parity . |
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| CMLBond
CORE Interface DTD Class main class: supports <bond> elements |
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| CMLBondArray
DTD Class May become obsolete as bondArray is only syntactic |
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| CMLBondFactory
Creates Bonds of appropriate subclass |
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| CMLBondStereo
CORE Interface DTD Class supports bond-based stereochemistry |
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| CMLCoordinate2
CORE Interface DTD Class (x, y) coordinate |
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| CMLCoordinate3
CORE Interface DTD Class (x, y, z) coordinate |
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| CMLCrystal
CORE Interface DTD Class Supports a crystallographic unit cell (parameters and spacegroup). |
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| CMLDocument
CORE Interface DTD Class |
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| CMLElectron
DTD Class Semantics not yet formulated. |
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| CMLException
CORE Interface CML-Specific exceptions may be thrown by CML-DOM classes and interfaces. |
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| CMLFeature
DTD Class For macromolecules. |
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| CMLFloatVal
DTD Class holds a float with max and minimum values |
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| CMLFormula
CORE Interface DTD Class Semantics being developed. |
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| CMLIntegerVal
holds an integer with max and minimum values |
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| CMLIsotope
CORE Interface Class to hold varities of isotope information |
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| CMLMolecule
CORE Interface CMLMolecule is the basic container for Atoms, Bonds, Electrons Angles, CMLTorsion, Sequences, Features, CMLCrystal and other objects. |
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| CMLMoleculeFactory
Creates Molecules of appropriate subclass |
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| CMLSequence
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| CMLStringArray
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| CMLStringVal
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| CMLSymbol
a placeholder for the need to hold symbolic values (e.g. |
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| CMLTorsion
CORE Interface supports torsion angle element in CML DTD. |
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| ConventionCriteria
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