- All Superinterfaces:
- org.xmlcml.cml.subset.BondSet, java.lang.Cloneable, org.xmlcml.cml.subset.ToolHashSet
- public interface ChainSet
- extends org.xmlcml.cml.subset.BondSet
| Methods inherited from interface org.xmlcml.cml.subset.BondSet |
addBond, addSubstituent, and, calculateCoordinates, contains, containsAtom, getAtomSet, getCoord2, getSubstituentDirection, getSubstitutedAtomMap, not, or, setCoord2, substituentString, transformAndAddTo, transformBy, translateBy, xor |
| Methods inherited from interface org.xmlcml.cml.subset.ToolHashSet |
add, addAll, and, clone, contains, debug, getId, iterator, not, or, remove, removeAll, retainAll, setId, size, xor |
getBondsSeparating
public java.util.Vector getBondsSeparating(org.xmlcml.cml.CMLAtom atom)
- gets bondVector separating two atoms (hence get distance)