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Package org.xmlcml.noncml
| Interface Summary | |
| CASTEP | class for CASTEP files |
| CIF | class for CIF |
| Dummy | class for Dummy output files (NYI) |
| Format | class for formatted files (e.g. |
| G94 | class for G94 output files (NYI) |
| GAMESS | class for GAMESS output files (NYI) |
| JCAMP | class for JCAMP output files (NYI) |
| JME | class for JME files (Peter Ertl's applet); |
| MDLMol | class to read (? and write?) mdl-molfiles as described in chemical MIME. |
| MIF | class for CIF |
| MMCIF | class for CIF |
| MOL2 | class for Sybyl MOL2 files (NYI) |
| MOPAC | class for MOPAC output files (NYI) |
| MOPACF | class for MOPAC output files (NYI) |
| MOPACIn | class for MOPAC output files (NYI) |
| NonCMLDocument | an interface for input/output of non-CML information (e.g. |
| PDB | class for PDB files |
| PDBConect | class to read (? and write?) PDBConect files (e.g. |
| PDBF | class for PDB files using legacyParser |
| PreStyle | class for formatted files (e.g. |
| SDF | class to read and write MDL SDFiles |
| SMILES | read/write SMILES |
| SwissF | class for SwissProt files using legacyParser |
| VAMP | class for VAMP files (NYI) |
| XYZ | class for JMOL XYZ files |
| Class Summary | |
| ABVal | |
| ATOMHETRecord | |
| BlockMatcher | |
| CASTEPImpl | class to read (? and write?) CASTEP files |
| Chemime | manages chemical/ files - still experimental. |
| CIFCore1DataBlockAdapter | an adapter class to provide convenience methods for access to data in dataBlocks |
| CIFImpl | class to read and write CIF files |
| DummyImpl | class to read (? and write?) Dummy files |
| Field | |
| FormatImpl | class to read formatted files |
| G94Impl | class to read (? and write?) G94 files |
| GAMESSImpl | class to read (? and write?) GAMESS files |
| JCAMPImpl | class to read (? and write?) JCAMP files |
| JCAMPVocab | |
| JMEImpl | class to read and write JME files (Peter Ertl's applet) |
| LigandConn | individual ligand in _struct_conn |
| LineMatcher | |
| MDLMolImpl | class to read (? and write?) mdl-molfiles as described in chemical MIME. |
| MIFCore1DataBlockAdapter | an adapter class to provide convenience methods for access to data in dataBlocks |
| MIFImpl | class to read and write CIF files |
| MMCIFImpl | class to read and write CIF files |
| MOL2Impl | class to read and write MOL2 files NYI |
| MOPACFImpl | class to read MOPAC files using parser |
| MOPACImpl | class to read (? and write?) MOPAC files |
| MOPACInImpl | class to read (? and write?) MOPAC files |
| NonCMLDocumentImpl | base class for all nonCML molecules |
| PDBConectImpl | class to read (? and write?) PDBConect files (e.g. |
| PDBFImpl | class to read PDB files using parser |
| PDBImpl | |
| PreStyleImpl | class to read formatted files |
| SDFImpl | class to read and write SDFiles |
| SMILESAtom | parse a SMILES atom [....]. |
| SMILESImpl | class to read and write SMILES files |
| StringVector | |
| SwissFImpl | class to read Swiss files using parser |
| VAMPImpl | class to read (? and write?) VAMP files |
| XYZImpl | class to read and write xyz files (Peter Ertl's applet) |
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